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Data warehouse / Database · Two-way sync platform

MotherDuck and Supabase integration — two-way sync

Keep supported MotherDuck and Supabase records aligned with two-way sync. Give each team access to current data while controlling which system can update each field.

Set this up from Claude or ChatGPT
  • Field mappings and sync direction under your control
  • Inspect and resolve record errors in one dashboard
Two-way sync for supported objects
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Example workflow

Plan table mappings between MotherDuck and Supabase

Validate the selected objects and operations even where connector-level direction is documented.

Starting eventA selected source table needs an operational replica, a reporting projection, or a migration copy.

  1. Choose actual tables in MotherDuck and Supabase and compare their schemas and record types.

  2. Specify the primary/business key, type conversions, filter boundaries, relationship dependencies, and the source of each writable field.

  3. Plan two-way sync around connector support and your update rules; use a source-to-destination copy for read-only records. Keep source views, aggregate outputs, and writable base tables distinct.

What to verifyCounts reconcile within identical filters; updates preserve keys; precision, nulls, deletes, and schema changes follow the agreed mapping rules.

Review records and field ownership

AI assistant

Set up MotherDuck and Supabase from Claude or ChatGPT

Connect the Stacksync MCP server to your AI assistant, then ask for the sync in plain language. You only sign in; there is no code to write and no API key to paste.

1. Add the Stacksync MCP server

Server URL

https://mcp.stacksync.com/mcp

In Claude

  1. Open Customize → Connectors, select + Add, then Add custom connector.
  2. Name it Stacksync and enter https://mcp.stacksync.com/mcp.
  3. Select Connect, sign in to Stacksync and choose your workspace.

In ChatGPT

  1. Open Settings → Apps → Advanced settings and turn on Developer mode.
  2. Select Create app, name it Stacksync, enter https://mcp.stacksync.com/mcp and choose OAuth.
  3. Sign in to Stacksync, then enable Stacksync from the tools menu in a chat.
Set up Codex or Claude Code

Codex

codex mcp add stacksync --url https://mcp.stacksync.com/mcp
codex mcp login stacksync

Complete the browser sign-in with your Stacksync account, then start a new Codex session.

Claude Code

claude mcp add --transport http stacksync https://mcp.stacksync.com/mcp

Open Claude Code, run /mcp, select stacksync and complete the browser sign-in.

Then ask: “List my Stacksync workspaces.” Sign-in connects your assistant; it does not create a sync yet.

Claude Code, Codex, Cursor, VS Code, Windsurf, Gemini CLI and other assistants: setup steps in the docs.

2. Ask your assistant

Create a two-way sync between my MotherDuck and Supabase.

Also from the same chat

You can also ask for workflows and AI agents (Genies) that use MotherDuck and Supabase. The assistant checks what each app supports, for example:

  • “Build a workflow that messages our team in Slack when a MotherDuck record changes.”
  • “Create a Genie that answers questions about our Supabase data in Slack.”

What happens next

  • Signs you in with your Stacksync login (OAuth). No API key is pasted into the chat.
  • Gives you a secure sign-in link for each app it connects; you open it and sign in to that app.
  • Builds the sync with your permissions in Stacksync, nothing more. Turn on Ask before every change in the MCP settings to approve each change first.

New to Stacksync? Create an account first, then sign in from your assistant.

Mapping essentials

Records and field ownership

Match records by stable IDs and assign an owner for each field. The record notes identify the coverage to check.

Download the mapping worksheet

CSV · No email required

Choose the tables you need in MotherDuck and Supabase, then map their keys, field types, and filters. Your schemas determine how records relate and which system should own each field. Use the worksheet to document those choices before testing the first load.

Why teams connect MotherDuck and Supabase

Put your MotherDuck and Supabase data to work

Start with the work your team needs to complete: keep records up to date, make operational data available for reporting, or move data to a new system. Choose one MotherDuck and Supabase workflow to test, define what success looks like, and decide who handles failed updates.

  • Land CRM and operational database records in MotherDuck so a small team gets warehouse-style analytics without cluster management

  • Sync modeled MotherDuck tables outward to operational tools for activation

  • Sync application tables in Supabase with the CRM two-way so new signups appear as contacts and sales edits flow back to the app

  • Mirror billing and subscription records into Supabase tables the application can join directly

What records can you sync?

Start with the records your workflow needs. Check each system’s read and write requirements before mapping fields.

MotherDuck

Read and write support varies by record

Record types covered in the setup guide

Record typesCoverage and requirements
  • Tables (confirm coverage)
See connector requirements. Confirm field permissions and sync direction.

Read the MotherDuck connector guide

Supabase

Read and write support varies by record

Record types covered in the setup guide

Record typesCoverage and requirements
  • Tables
See connector requirements. Confirm field permissions and sync direction.

Read the Supabase connector guide

Connection essentials

Review how each system connects, detects changes, and permits access to your records.

View setup requirements and limits
Connection requirementMotherDuckSupabase
Integration interfaceSQL through DuckDB clients and drivers using a MotherDuck (md:) connectionPostgreSQL connection through the Supabase IPv4-compatible Transaction Pooler
AuthenticationAccess token created in MotherDuckPostgres database credentials entered in the secure Stacksync connection form
Change detectionThe saved Stacksync guide does not specify the change-detection mechanism.Postgres connector requirements apply.
Read accessAvailable for supported recordsAvailable for supported records
Write accessAvailable for supported recordsAvailable for supported records

Enterprise controls

Security and control for your integrations

Explore security controls

Compliance and data transfers

As a data company, we understand the importance of keeping your data secure. Stacksync is built with security best practices to keep your data safe at every layer, and is DPF-certified for US, EU, UK and CH data transfers.

  • SOC 2 Type II
  • ISO 27001
  • HIPAA BAA
  • GDPR
  • CCPA
  • DPF US-EU-UK-CH

SSO & SCIM

Let your users access Stacksync from your centralized user management systems. Works with Okta, Azure, Google SSO and more.

Alerts

Immediately get alerted about record syncing issues over email, Slack, PagerDuty and WhatsApp. Resolve issues from a centralized dashboard with retry and revert options.

Secure connection options

Record-level recovery

Inspect sync errors and use retry and revert controls to resolve failed updates.

Read the recovery guide

Implementation

Technical reference

Review setup, record relationships, testing, and recovery for your implementation.

Authentication, permissions and API limits

Connection requirements and limits

MotherDuck
Integration interface
SQL through DuckDB clients and drivers using a MotherDuck (md:) connection
Authentication
Access token created in MotherDuck (Settings > General > Create Token), pasted into Stacksync; database name and schema configurable if not using defaults
Change detection
The saved Stacksync guide does not specify the change-detection mechanism. Confirm it for the selected objects.
Read access
Available for supported records
Write access
Available for supported records
Setup requirements
  • Generate a MotherDuck access token in Settings > General and enter it in the Stacksync connection form.
  • Specify the intended database and schema and confirm read/write coverage for the selected tables.
Limitations to check
  • Two-way sync is documented at connector level. Confirm table eligibility, writable columns, and the change-detection interval during setup.
Technical documentation

Documentation reviewed 2026-09-15. Check the linked guides for current account and record requirements.

MotherDuck setup guide
Supabase
Integration interface
PostgreSQL connection through the Supabase IPv4-compatible Transaction Pooler
Authentication
Postgres database credentials entered in the secure Stacksync connection form; use the Supabase IPv4-compatible Transaction Pooler connection string.
Change detection
Postgres connector requirements apply. If logical replication permissions are unavailable, the documented Postgres Heroku connector provides a trigger-based alternative, including for non-Heroku databases.
Read access
Available for supported records
Write access
Available for supported records
Setup requirements
  • Connect the Supabase database through the Postgres connection flow using an IPv4-compatible Transaction Pooler connection string.
  • Each synced table needs a single-column primary key with an automatically generated default.
  • The database role needs table ownership and the documented read, write, trigger and logging-schema permissions. Confirm the appropriate Postgres connector before creating the sync.
Limitations to check
  • IPv6 connections are not supported by Stacksync; select the IPv4-compatible Supabase pooler.
  • This evidence covers Postgres tables. It does not establish support for Supabase Auth or Storage APIs, or write access to managed schemas.
  • Verify the actual tables, fields and permissions in the connected workspace before enabling either direction.
Technical documentation

Documentation reviewed 2026-10-20. Check the linked guides for current account and record requirements.

Supabase setup guide

Prepare MotherDuck and Supabase access

Set up both accounts before testing the mapping. Use test records where available, and identify the account administrator who can approve access and help resolve setup errors.

MotherDuck setup checklist
  • Generate a MotherDuck access token in Settings > General and enter it in the Stacksync connection form.
  • Specify the intended database and schema and confirm read/write coverage for the selected tables.
Supabase setup checklist
  • Connect the Supabase database through the Postgres connection flow using an IPv4-compatible Transaction Pooler connection string.
  • Each synced table needs a single-column primary key with an automatically generated default.
  • The database role needs table ownership and the documented read, write, trigger and logging-schema permissions. Confirm the appropriate Postgres connector before creating the sync.

Setup guides: Authorize SupabasePostgres connectorRequired Postgres permissions

Prepare to go live

Record the fields each system can update, the first-load cutoff, both record IDs, the expected update delay, and who handles errors. Complete the tests before production before expanding to more records.

Use the MotherDuck and Supabase planning worksheet to capture these decisions. Record the access owner in the worksheet and enter credentials only in the connection setup.

See Stacksync in action · Review current pricing

Record identity and field ownership

Keep each record tied to its source ID. Use the references below to choose field owners and preserve relationships between records.

Download the mapping worksheet · CSV, no email required

Choose the tables you need in MotherDuck and Supabase, then map their keys, field types, and filters. Your schemas determine how records relate and which system should own each field. Use the worksheet to document those choices before testing the first load.

Compare integration approaches

Choose your tables and update rules before the integration method. A live application copy, a reporting table, and a one-time migration need different handling for updates, history, deletes, and reconciliation.

Stacksync managed sync

Best fit
Two-way sync for supported objects. Choose the records, writable fields, and permissions for your workflow.
Operating responsibility
Fits ongoing record synchronization when the required operations are supported. Add workflow steps for approvals or business actions that go beyond copying fields.
Before you choose
Provide your table or object schemas and one example update; confirm the supported keys, fields, and direction.

Native vendor integration

Best fit
A vendor-built integration may fit if it supports your MotherDuck and Supabase record types.
Operating responsibility
Can reduce setup for a supported workflow. You may need another method for records or business steps it does not cover.
Before you choose
First check whether either vendor offers this integration. If available, verify your record types, update direction, account tier, and related-record handling.

Custom API or workflow

Best fit
Consider when MotherDuck and Supabase need a transformation, approval, or action outside a direct record sync.
Operating responsibility
Provides control over business steps; the team owns credentials, version changes, error queues, and reconciliation.
Before you choose
Verify endpoint permissions, pagination, quotas, duplicate detection, and failure recovery.

File or scheduled snapshot

Best fit
Consider for a one-time MotherDuck / Supabase migration or a reporting need with an explicit freshness window.
Operating responsibility
Can simplify a bounded transfer; later changes and deletion history require another extraction or a separately designed incremental process.
Before you choose
Record the extraction cutoff, source IDs, encoding, date/number formats, and reconciliation totals.

Workflow scenarios and expected results

Plan table mappings between MotherDuck and Supabase

Validate the selected objects and operations even where connector-level direction is documented.

Starting event: A selected source table needs an operational replica, a reporting projection, or a migration copy.

  1. Choose actual tables in MotherDuck and Supabase and compare their schemas and record types.
  2. Specify the primary/business key, type conversions, filter boundaries, relationship dependencies, and the source of each writable field.
  3. Plan two-way sync around connector support and your update rules; use a source-to-destination copy for read-only records. Keep source views, aggregate outputs, and writable base tables distinct.

Expected result: Counts reconcile within identical filters; updates preserve keys; precision, nulls, deletes, and schema changes follow the agreed mapping rules.

If it fails: Compare current source state, key mapping, and destination constraints before retrying. Reconcile the backlog after any schema or permission change.

Initial load and acceptance testing

Keep both record IDs with the expected and actual result. Reconcile the same filters and time window in each system.

Direction and permissions

Test case

Check that each connected account can read and write the chosen objects. Exercise both directions with a test record before enabling production changes.

Expected result

Only an approved, supported direction and permitted fields are written.

Schema, keys, and reconciliation

Test case

Use an actual MotherDuck and Supabase table. Compare key uniqueness, nulls, decimal precision, timezone conversions, and counts within identical filters.

Expected result

The process meets its agreed freshness target and reconciliation has no unexplained differences.

Failed updates, retries and recovery

Start with the failed record and the destination error, then inspect the source value, field requirements, and access.

A record type or update is unavailable

Investigate

Check the MotherDuck and Supabase connector guides, account permissions, and any operations marked On Request.

Next action

Ask the integration team to confirm a supported way to handle that record. Verify whether it needs connector configuration or a separate workflow step.

Source and destination disagree after a retry

Investigate

Compare current source values, destination validation, identity mappings, and any side effects already completed.

Next action

Stacksync issue retry reads the current source state. Decide the intended state before retrying or reverting; reconcile downstream effects separately.

Read the Stacksync issues dashboard guide for retry and revert behavior.

Change detection and update delivery

How updates move between MotherDuck and Supabase

See how each system detects changes and which updates the other system can receive. Each direction has its own permissions and record requirements.

MotherDuck Supabase Timing depends on the connected systems

Detect changesThe saved Stacksync guide does not specify the change-detection mechanism. Confirm it for the selected objects.

Apply updatesSelected writable fields update in Supabase. Its permissions and validation rules still apply; rejected records can be inspected in the Issues dashboard.

Supabase MotherDuck Timing depends on the connected systems

Detect changesPostgres connector requirements apply. If logical replication permissions are unavailable, the documented Postgres Heroku connector provides a trigger-based alternative, including for non-Heroku databases.

Apply updatesSelected writable fields update in MotherDuck. Its permissions and validation rules still apply; rejected records can be inspected in the Issues dashboard.

Update timing and record limits
  • Measure initial-load and ongoing-change latency separately. Source detection, selected objects, account limits, and destination validation determine the observed delay.
  • Two-way sync is documented at connector level. Confirm table eligibility, writable columns, and the change-detection interval during setup.
FAQ

MotherDuck and Supabase integration FAQ

Next step

See your workflow in Stacksync

Walk through your MotherDuck and Supabase records, field mappings, and requirements with an integration engineer.